sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCR-01159-01133
X
>3CCE-01159-01133
X
>3G71-01159-01133
X
>1VQN-01159-01133
X
>2QEX-01159-01133
X
>1VQM-01159-01133
X
>1VQO-01159-01133
X
>1VQ4-01159-01133
X
</seq>
<hsp>
0 1:0.192000453821
0 2:0.999990496557
0 3:0.983518035303
0 4:0.992943047889
0 5:0.954192714518
0 6:0.809810152548
0 7:0.786932846352
1 2:0.877958821777
1 3:0.910903085564
1 4:0.866593151415
1 5:0.863572584905
1 6:0.715804793828
1 7:0.637493585454
2 3:0.576940175219
2 4:0.302375798934
2 5:0.38628368448
2 6:0.410077011005
2 7:0.413528258449
3 4:0.46699794081
3 5:0.206300001752
3 6:0.291405302517
3 7:0.71757307087
4 5:0.294870240666
4 6:0.352270060991
4 7:0.44497050658
5 6:0.208493301118
5 7:0.571953694932
6 7:0.444504974705
</hsp>