sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q82-A254-A253
X
>3CME-0213-0212
X
>3U5B-21652-21651
X
>3F1E-A1350-A1349
X
>2ZJR-X431-X430
X
>2QEX-0556-0555
X
>364D-B5-B4
X
>3CCU-0556-0555
X
>1YJW-0556-0555
X
>3CXC-0556-0555
X
>1VQL-0556-0555
X
>1JJ2-0556-0555
X
>1VQ9-0556-0555
X
</seq>
<hsp>
0 1:0.45315494235
0 2:0.753057254195
0 3:0.924643466149
0 4:0.76540270638
0 5:0.691265898909
0 6:0.660046848342
0 7:0.728324784853
0 8:0.67121961275
0 9:0.727514220972
0 10:0.918612592101
0 11:0.88063127681
0 12:0.842803428486
1 2:0.727767667394
1 3:0.804704028807
1 4:0.803707270089
1 5:0.615896868918
1 6:0.49656798107
1 7:0.697265995784
1 8:0.611357845179
1 9:0.581867390686
1 10:0.851626954644
1 11:0.766415904924
1 12:0.751159106976
2 3:0.778764409289
2 4:0.369396732773
2 5:0.637969013109
2 6:0.898953758889
2 7:0.666464394971
2 8:0.652694060316
2 9:0.679270203874
2 10:0.82901402191
2 11:0.813215124449
2 12:0.776323492855
3 4:0.954695768538
3 5:0.54298696516
3 6:0.936951872959
3 7:0.886059441179
3 8:0.8889910743
3 9:0.863856082548
3 10:0.942341437922
3 11:1.0
3 12:0.943829252907
4 5:0.625653581357
4 6:0.828515749924
4 7:0.468660138039
4 8:0.486583458884
4 9:0.543759071759
4 10:0.634990161703
4 11:0.626026390889
4 12:0.595135882957
5 6:0.585404980945
5 7:0.372290949087
5 8:0.40267952668
5 9:0.46057758873
5 10:0.51412264062
5 11:0.544041176542
5 12:0.520454037414
6 7:0.539046728177
6 8:0.423186430785
6 9:0.386972592301
6 10:0.542548096188
6 11:0.457898733015
6 12:0.450410647225
7 8:0.149382763884
7 9:0.294731958376
7 10:0.318341016346
7 11:0.289347881201
7 12:0.303447699932
8 9:0.204932332417
8 10:0.326322868792
8 11:0.244309112693
8 12:0.253897590347
9 10:0.315252605414
9 11:0.229586059278
9 12:0.197240111426
10 11:0.195454244954
10 12:0.147520787309
11 12:0.124146207295
</hsp>