sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q81-A2117-A2062
X
>1VQ8-02117-02062
X
>3OHJ-A2068-A1991
X
>1VQM-02117-02062
X
>1VQK-02117-02062
X
>1VQL-02117-02062
X
>3CC2-02117-02062
X
>1VQ4-02117-02062
X
>3CCV-02117-02062
X
>3G6E-02117-02062
X
>1YIT-02117-02062
X
>3CCR-02117-02062
X
</seq>
<hsp>
0 1:0.854148341377
0 2:0.99999775301
0 3:0.934496129836
0 4:0.810781554477
0 5:0.887222445466
0 6:0.751615721446
0 7:0.688628990835
0 8:0.594283961997
0 9:0.739135560156
0 10:0.576962465846
0 11:0.506192530074
1 2:0.821418023237
1 3:0.184692313478
1 4:0.182994561197
1 5:0.389690954185
1 6:0.319035194339
1 7:0.664084422644
1 8:0.532002202395
1 9:0.386489289926
1 10:0.662603569689
1 11:0.523009017198
2 3:0.717338566897
2 4:0.66410246502
2 5:0.754251166486
2 6:0.718905092041
2 7:0.516725546527
2 8:0.671344309412
2 9:0.578161500474
2 10:0.742043003953
2 11:0.647850834653
3 4:0.158345878733
3 5:0.342652449901
3 6:0.306021643587
3 7:0.606394718209
3 8:0.534297506539
3 9:0.340210105747
3 10:0.667874841528
3 11:0.550065786135
4 5:0.320011726948
4 6:0.238949712139
4 7:0.506910411869
4 8:0.42308262257
4 9:0.230990621938
4 10:0.552348562964
4 11:0.408438624127
5 6:0.352896334647
5 7:0.487397992623
5 8:0.511878957252
5 9:0.326430716318
5 10:0.489406298101
5 11:0.490984585855
6 7:0.466865238422
6 8:0.289641851773
6 9:0.23623312547
6 10:0.471868134983
6 11:0.371246601365
7 8:0.384172035096
7 9:0.335636080623
7 10:0.304010821259
7 11:0.307124190473
8 9:0.349643644023
8 10:0.409509744326
8 11:0.291065737684
9 10:0.375056945734
9 11:0.283777570408
10 11:0.261176411203
</hsp>