sequences=22
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QEX-01836-01835
X
>2J01-A2671-A2670
X
>1J6S-C4-C3
X
>3OHJ-A366-A365
X
>3OH7-A535-A534
X
>1N32-A1065-A1064
X
>2BNY-S4-S3
X
>2V3C-M9-M8
X
>3OHK-A1181-A1180
X
>2J03-A366-A365
X
>1YI2-02262-02261
X
>3G6E-02262-02261
X
>3F1F-A2692-A2691
X
>2J01-A366-A365
X
>429D-C2-C1
X
>3OH7-A1433-A1432
X
>2UUB-A37-A36
X
>3DIR-A160-A159
X
>2ZJR-X140-X139
X
>2VQE-A516-A515
X
>2DRA-B1-B0
X
>3OHC-A484-A483
X
</seq>
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