sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Y99-B9-B8
X
>3OHY-A415-A414
X
>3OHZ-A11-A10
X
>3OHD-A571-A570
X
>3F1H-A2381-A2380
X
>3R8S-A648-A647
X
>3KNK-A413-A412
X
>2J00-A148-A147
X
</seq>
<hsp>
0 1:0.875247833275
0 2:0.849632830524
0 3:0.830317526763
0 4:0.65558953691
0 5:1.0
0 6:0.823095711419
0 7:0.886876485799
1 2:0.286176366875
1 3:0.721377926419
1 4:0.639416441448
1 5:0.894041557229
1 6:0.764746756435
1 7:0.72937764023
2 3:0.808470010575
2 4:0.743902924769
2 5:0.916362368173
2 6:0.624720991306
2 7:0.681682923466
3 4:0.392807372636
3 5:0.329309595642
3 6:0.759207797603
3 7:0.534071852469
4 5:0.63832725888
4 6:0.877785556972
4 7:0.722319256112
5 6:0.712905749245
5 7:0.416996924296
6 7:0.398066354196
</hsp>