sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHK-A1954-A1953
X
>1YJN-0759-0758
X
>1VQ4-0759-0758
X
>2QEX-01786-01785
X
>3F1H-A1455-A1454
X
>3CC4-0759-0758
X
>3F1H-A2032-A2031
X
</seq>
<hsp>
0 1:0.591927871812
0 2:0.644610656961
0 3:0.628853794784
0 4:0.658866213007
0 5:0.628637388515
0 6:0.960704084457
1 2:0.249530035053
1 3:0.648633639205
1 4:0.777483109853
1 5:0.368374319908
1 6:1.0
2 3:0.583852283738
2 4:0.787919738999
2 5:0.172899004059
2 6:0.871974558921
3 4:0.414619706437
3 5:0.576292854624
3 6:0.701571122252
4 5:0.768641035019
4 6:0.738365470071
5 6:0.751859286106
</hsp>