sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CC2-02037-02036
X
>1VQM-02037-02036
X
>1Z43-A8-A7
X
>3R8T-A577-A576
X
>1N32-A1121-A1120
X
>3F1E-A652-A651
X
</seq>
<hsp>
0 1:0.152216459103
0 2:0.944264050238
0 3:0.423455632434
0 4:0.588103368021
0 5:0.824461278927
1 2:0.866483649184
1 3:0.3346463072
1 4:0.561308620788
1 5:0.73450646872
2 3:0.722763703178
2 4:0.999996050359
2 5:0.874369569447
3 4:0.493533501092
3 5:0.639494825396
4 5:0.546489489531
</hsp>