ClaRNA

Doublet Group info: classifier/stacking/<</GA/sub-002

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</GA/sub-002
Members:
count: 65
download members
2J03:A708:A707
3U5H:52253:52252
1KD1:A40:A39
3CCR:01738:01737
2J01:A2230:A2229
3CCU:040:039
3F1H:A2624:A2623
1VQN:01890:01889
3B4C:B72:B71
1NJI:A1738:A1737
3CD6:0372:0371
3OHZ:A1807:A1806
3CC4:01162:01161
1K9M:A1162:A1161
1HR2:B39:B38
1H3E:B14:B13
2UXC:A611:A610
1YIJ:0147:0146
1N8R:A1004:A901
2ANN:B18:B17
2ZJR:X1130:X1129
3CD6:0147:0146
1YJ9:02597:02596
1KD1:A943:A942
3CCJ:0785:0784
1VQ7:0943:0942
3FOZ:C14:C13
1GTS:B20:B19
1NJI:A943:A942
2OUE:B6:B5
2J02:A1433:A1432
3F1F:A513:A512
1VQ7:0580:0579
1YJW:0580:0579
1Q82:A2179:A2178
1VQL:02581:02580
3CCR:02581:02580
1YIT:02179:02178
3CC2:02179:02178
2OTJ:02198:02197
1YJN:01278:01277
3F1H:A1393:A1392
1YHQ:02198:02197
3OH7:A1323:A1322
1KD1:A697:A696
1M90:A785:A784
1VQ6:0444:0443
1YJW:0697:0696
3CC4:0320:0319
1GID:A38:A37
3B4A:B72:B71
1Q86:A320:A319
3CCQ:02179:02178
3CD6:02597:02596
1M90:A320:A319
3CCU:0785:0784
1S72:0320:0319
3OGY:A562:A561
1S72:0444:0443
1YI2:0487:0486
1YIJ:02581:02580
3G71:0697:0696
2R8S:R117:R116
2OIU:Q39:Q38
3I56:0487:0486
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 13 0.120
stacking/>> 35 0.129
base-ribose/H_0BR 3 0.137
stacking/<< 32 0.152
base-phosphate/H_0BPh 12 0.385
base-phosphate/W_3BPh 2 0.490
base-phosphate/H_7BPh 19 0.586
base-phosphate/W_5BPh 2 0.593
base-ribose/H_7BR 1 0.623
base-phosphate/SW_2BPh 3 0.639

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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