ClaRNA

Doublet Group info: classifier/stacking/<</GA/sub-003

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</GA/sub-003
Members:
count: 53
download members
1JBT:C26:C25
3CC7:952:951
3OXM:B85:B84
1Q81:A2158:A2157
3TRA:A71:A70
3CD6:0779:0778
3OH5:A1098:A1097
2QEX:07:06
3SKL:B55:B54
2QUX:R9:R8
3OWW:B84:B83
2OTJ:02330:02329
1I6U:D11:D10
3F1H:A196:A195
1VTQ:A71:A70
3OH7:A1098:A1097
1VQ6:0779:0778
1VQ5:01154:01153
1VQN:02056:02054
3U5D:11157:11156
3P59:C5:C4
3CCJ:02028:02027
3CCV:01384:01383
3CCM:0108:0107
3E5E:A10:A9
3CCV:0277:0276
3CCS:0779:0778
1Y6T:B22:B21
1Q81:A7:A6
3CCJ:01182:01181
3P22:C37:C36
2D2K:C4:C3
1EHZ:A29:A28
3MUR:R72:R71
3DJ0:A91:A90
3CCE:01781:01780
1A9N:Q21:Q20
1FJG:A627:A626
3OH7:A2200:A2199
1Q81:A1526:A1525
1YJN:02224:02223
1QBP:B5:B4
1YI2:01121:01120
2OUE:C4:C3
3B5S:B17:B16
1S72:02224:02223
3HHN:E96:E95
3G6E:02224:02223
3OUY:D4:D3
2UUA:A399:A398
3G71:01182:01181
1X9C:C4:C3
1VQN:01182:01181
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<< 25 0.090
base-ribose/H_0BR 8 0.140
stacking/<> 51 0.197
stacking/>> 18546 0.203
base-phosphate/H_0BPh 2 0.333
base-phosphate/W_6BPh 2 0.397
base-ribose/SW_2BR 1 0.441
base-phosphate/W_5BPh 2 0.452
base-phosphate/SW_2BPh 1 0.568
base-phosphate/S_1BPh 10 0.572

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol