sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHK-A207-A206
X
>3U5H-52893-52892
X
>1YJN-0725-0724
X
>3CC2-0725-0724
X
>1JJ2-02537-02536
X
>1VQ4-0747-0881
X
>1Y39-D17-D16
X
>1VQ9-0747-0881
X
>2ZJR-X1464-X1463
X
>2QEX-0747-0881
X
>1S72-01714-01713
X
>2V3C-N24-N23
X
>1FJG-A1337-A1336
X
>3CR1-B6-B5
X
>1XMQ-A316-A315
X
>1VQP-02537-02536
X
>3GES-A31-A30
X
>3BBM-B6-B5
X
</seq>
<hsp>
0 1:0.353232018425
0 2:0.612058021483
0 3:0.67868339308
0 4:0.676501524854
0 5:0.999997888923
0 6:0.643683011088
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16 17:0.206975905429
</hsp>