sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-5455-5454
X
>1VQP-01104-01103
X
>2PXT-B40-B39
X
>3OI0-A6-A5
X
>3F1H-A2678-A2677
X
>1VQK-01104-01103
X
>1Q81-A2446-A2445
X
>1NJI-A1104-A1103
X
>1YJN-01104-01103
X
>3R8S-A282-A281
X
>3CD6-02583-02582
X
>3R8S-A2334-A2333
X
>2QEK-B18-B17
X
>1K9M-A2113-A2112
X
>1FJG-A10-A1373
X
</seq>
<hsp>
0 1:0.307353832273
0 2:0.502723513246
0 3:0.51638239715
0 4:0.51946236537
0 5:0.298370099482
0 6:0.455074262919
0 7:0.511359958463
0 8:0.51701176504
0 9:0.818873866368
0 10:0.61036193465
0 11:0.999744330125
0 12:0.581417742991
0 13:0.933956344008
0 14:0.999992750224
1 2:0.237249851763
1 3:0.487986154109
1 4:0.408565174006
1 5:0.128521108052
1 6:0.370737502628
1 7:0.266915292404
1 8:0.355031104887
1 9:0.670459175108
1 10:0.469275170538
1 11:0.881486502011
1 12:0.470156872086
1 13:0.798428981826
1 14:0.830723878163
2 3:0.516396679004
2 4:0.336958201169
2 5:0.314508765805
2 6:0.502047401475
2 7:0.276298499691
2 8:0.420723594675
2 9:0.600151475198
2 10:0.544662226341
2 11:0.863016394618
2 12:0.434673732542
2 13:0.693933578309
2 14:0.758478274915
3 4:0.286144848492
3 5:0.468523125457
3 6:0.407604281275
3 7:0.533385063146
3 8:0.540846039095
3 9:0.668808506199
3 10:0.588188138399
3 11:0.872925487204
3 12:0.421670698379
3 13:0.721683278203
3 14:0.850899379801
4 5:0.440372342315
4 6:0.501927488549
4 7:0.44627665884
4 8:0.512963236319
4 9:0.579409511622
4 10:0.615392642745
4 11:0.855093776128
4 12:0.348469741434
4 13:0.64775558982
4 14:0.77600457863
5 6:0.305116483674
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5 9:0.622805784179
5 10:0.380732689431
5 11:0.803419435139
5 12:0.421856903695
5 13:0.753264277306
5 14:0.783411237018
6 7:0.345360519611
6 8:0.294337698785
6 9:0.617961692359
6 10:0.281339197445
6 11:0.731472730305
6 12:0.466709634334
6 13:0.793165330769
6 14:0.731856459161
7 8:0.209176934908
7 9:0.465362698014
7 10:0.313133890734
7 11:0.67468984899
7 12:0.402943121299
7 13:0.686815790439
7 14:0.612333324724
8 9:0.425992037529
8 10:0.154428413283
8 11:0.54673471456
8 12:0.335899095675
8 13:0.621046531413
8 14:0.536984274784
9 10:0.4702171634
9 11:0.34310662106
9 12:0.356342772483
9 13:0.457324140189
9 14:0.318441576163
10 11:0.508124019925
10 12:0.426838297369
10 13:0.669801065459
10 14:0.527629696118
11 12:0.561890896271
11 13:0.567650445298
11 14:0.286233345399
12 13:0.396927953723
12 14:0.532008837257
13 14:0.480762089191
</hsp>