sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CC2-081-080
X
>3CCE-02748-02747
X
>1VQP-081-080
X
>2ZJR-X2626-X2625
X
>2QEX-0106-0117
X
>3CCS-0106-0117
X
>1YIJ-0106-0117
X
</seq>
<hsp>
0 1:0.637648361094
0 2:0.129635371887
0 3:0.575580000544
0 4:0.999998738165
0 5:0.867607144842
0 6:0.948492563533
1 2:0.520015350261
1 3:0.356766638079
1 4:0.618266908405
1 5:0.53689909596
1 6:0.558112730453
2 3:0.496806300016
2 4:0.928009864452
2 5:0.792620386274
2 6:0.869475971252
3 4:0.681675126012
3 5:0.618751398432
3 6:0.655238956793
4 5:0.247426626181
4 6:0.199157255486
5 6:0.249853252687
</hsp>