ClaRNA

Doublet Group info: classifier/stacking/<</GC/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</GC/sub-001
Members:
count: 119
download members
3G71:02357:02356
3OH7:A956:A955
2OTL:02357:02356
1VQ6:0519:0518
3OHJ:A956:A955
3CC2:0519:0518
1FFK:0897:0896
3U5D:1808:1807
3KNI:A2377:A2376
1VQ6:0284:0283
2J02:A1418:A1417
3OH5:B17:B16
3CC7:0284:0283
3CC7:01621:01620
1VQ4:991:990
1YIT:0519:0518
2J02:A668:A667
3CC7:01505:01504
3R8S:A732:A731
3OHJ:A1884:A1883
1K8A:A1664:A1663
1YIT:991:990
1QVG:01723:01722
3KNI:A1883:A1882
2OEU:A35:A34
3OI1:A1753:A1752
1Q86:A694:A693
3CCQ:01505:01504
1K8A:A1723:A1722
3CD6:991:990
1MHK:S6:S5
1N8R:A463:A462
1YIJ:01505:01504
1VQM:0102:0101
1Q82:A2708:A2707
1YIJ:0102:0101
1VQ5:01505:01504
1VQ6:01664:01663
1YLS:B15:B14
3OHZ:A1753:A1752
3G71:991:990
3KNI:A2310:A2309
1Q86:A1664:A1663
1YI2:01505:01504
1QVG:0694:0693
1VQM:01664:01663
3CXC:0694:0693
1FEU:E3:E2
1VQO:01664:01663
1Q82:A1664:A1663
3D0U:A67:A66
3CCL:02193:02192
1K8A:A694:A693
3CC7:02193:02192
1VQ5:01621:01620
3OH5:A2302:A2301
1VQN:02708:02707
3R8O:A856:A855
3Q51:A7:A6
3OH7:A2601:A2600
1N32:A830:A829
1VQK:01664:01663
2VQE:A1418:A1417
3CMA:02708:02707
2ZJR:X1292:X1291
1VQO:01529:01528
3U5D:12593:12592
1YHQ:0694:0693
3DH3:G8:G7
3R8T:A1960:A1959
3KNK:A1798:A1797
1Q86:A1529:A1528
2QEX:01529:01528
3OGE:A1418:A1417
2XLK:C5:C4
3DIZ:A70:A69
3OHJ:A2718:A2717
3F1F:A2872:A2871
3V7E:C41:C40
3R8N:A579:A578
3F1H:A2872:A2871
3OI1:A630:A629
3CCQ:02708:02707
3OH7:A1074:A1073
2H0X:B114:B113
3CPW:01529:01528
3I56:01529:01528
2UUA:A99:A98
1M90:A1529:A1528
1QVG:0394:0393
1K8A:A1529:A1528
1XMQ:A1412:A1411
3CCU:02721:02720
1S72:01529:01528
1S72:0394:0393
3R8S:A2344:A2343
1JJ2:0394:0393
1K9M:A1529:A1528
3CCS:0394:0393
1VQP:0394:0393
3R8T:A2343:A2342
1FFK:0393:0392
3U5F:6624:6623
3OHK:A1320:A1319
3CCE:0394:0393
3G6E:0394:0393
3OHZ:A1320:A1319
1N78:C55:C54
2ZY6:A25:A24
2CV2:D55:D54
2CV2:C55:C54
3KNK:A630:A629
3CCQ:0394:0393
3CD6:0394:0393
2UXC:A1280:A1279
1VQ4:0394:0393
1YIT:0394:0393
3OHD:A1280:A1279
1FJG:A1280:A1279
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 12 0.042
base-ribose/W_6BR 5 0.081
base-phosphate/W_6BPh 1 0.093
stacking/>> 10 0.096
stacking/<< 42 0.097
base-phosphate/H_7BPh 75 0.156
base-phosphate/H_8BPh 5 0.177
base-phosphate/H_9BPh 2 0.240
base-ribose/SW_2BR 2 0.261
base-ribose/H_7BR 31 0.298

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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