ClaRNA

Doublet Group info: classifier/stacking/<</GC/sub-003

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</GC/sub-003
Members:
count: 42
download members
3CCL:01621:01620
1VQM:01621:01620
1VQ7:01621:01620
3R8N:A1302:A1301
2QA4:01638:01637
1VQ4:01621:01620
1YIJ:0280:0279
1VQL:01621:01620
2QEX:0280:0279
1YHQ:01621:01620
1QVG:0280:0279
1JJ2:0280:0279
2UUB:A1439:A1438
3CC2:0280:0279
1VQ9:0280:0279
3CME:01621:01620
3F1F:A317:A316
2J03:A1546:A1545
1Q86:A1639:A1638
3CCQ:0280:0279
1N8R:A280:A279
3F1H:A317:A316
1Q81:A1639:A1638
3AKZ:E54:E53
1VQ9:01621:01620
2ZJR:X1524:X1523
1YJN:01639:01638
2OTL:01639:01638
3CC7:01639:01638
1YJN:0280:0279
1VQP:01639:01638
1VQL:01639:01638
1JJ2:01639:01638
1YHQ:01639:01638
3F1H:A1437:A1436
1XMQ:A439:A438
2UUA:A439:A438
3OHD:A439:A438
2J00:A1006:A1005
2UUB:A439:A438
1N32:A439:A438
3KNI:A2080:A2079
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>> 3 0.179
stacking/<> 1 0.239
base-ribose/H_9BR 1 0.324
base-phosphate/S_1BPh 1 0.335
base-ribose/H_0BR 5 0.396
stacking/<< 2 0.440
base-phosphate/H_9BPh 7 0.472
base-ribose/W_3BR 1 0.494
base-phosphate/W_6BPh 42 0.500
base-phosphate/H_7BPh 13 0.518

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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