sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI0-A1110-A1109
X
>2J01-A2345-A2344
X
>2J03-A2345-A2344
X
>3KNK-A1545-A1544
X
>1YJ9-01572-01571
X
>1VQM-0552-0551
X
>1YJ9-0552-0551
X
>1K8A-A552-A551
X
>1Q86-A552-A551
X
>3CC7-0552-0551
X
>3CCR-0552-0551
X
>1YIJ-0552-0551
X
>1VQ4-0552-0551
X
>2QEX-0552-0551
X
>3CD6-0552-0551
X
</seq>
<hsp>
0 1:0.572920764044
0 2:0.571142514956
0 3:0.583464176844
0 4:0.558291553636
0 5:0.560598742274
0 6:0.363254273446
0 7:0.465184572352
0 8:0.428701639568
0 9:0.473809452208
0 10:0.414163968806
0 11:0.311006628835
0 12:0.332644991204
0 13:0.488957110888
0 14:0.401044037126
1 2:0.0333612707027
1 3:0.998278545999
1 4:0.827494322036
1 5:0.966212061882
1 6:0.791068225781
1 7:0.776289481162
1 8:0.754254068865
1 9:0.846608877816
1 10:0.726366539902
1 11:0.602231968788
1 12:0.679193437533
1 13:0.713294149836
1 14:0.669314225935
2 3:0.999997875885
2 4:0.825101305959
2 5:0.958413284016
2 6:0.782084064092
2 7:0.765679762398
2 8:0.746073200294
2 9:0.836770531652
2 10:0.720140458654
2 11:0.595567916386
2 12:0.67437178582
2 13:0.708376134404
2 14:0.66290947525
3 4:0.487744555756
3 5:0.381778365288
3 6:0.45025815579
3 7:0.50995618625
3 8:0.495180596778
3 9:0.47093506988
3 10:0.506417828245
3 11:0.522661120635
3 12:0.436613948251
3 13:0.530910125369
3 14:0.487451701189
4 5:0.360861935964
4 6:0.397714388712
4 7:0.344867695616
4 8:0.451519539797
4 9:0.332991418055
4 10:0.236805318934
4 11:0.338519319678
4 12:0.346522316568
4 13:0.289649318037
4 14:0.359561363749
5 6:0.232747464226
5 7:0.284050552195
5 8:0.358833232636
5 9:0.154373812023
5 10:0.309257351059
5 11:0.375465467467
5 12:0.306525480446
5 13:0.352729325149
5 14:0.343264326241
6 7:0.2046061992
6 8:0.24247250008
6 9:0.144343021256
6 10:0.2627039439
6 11:0.225019551986
6 12:0.18994163005
6 13:0.337826596391
6 14:0.264572731645
7 8:0.163450171202
7 9:0.187168681664
7 10:0.287754910634
7 11:0.232429789854
7 12:0.271478389692
7 13:0.329549439273
7 14:0.324132525348
8 9:0.28648237829
8 10:0.379995811974
8 11:0.264365880419
8 12:0.296140003982
8 13:0.397754044512
8 14:0.376626083089
9 10:0.213375378916
9 11:0.255407164054
9 12:0.222763655833
9 13:0.272602297272
9 14:0.263967972267
10 11:0.188899556358
10 12:0.188631448329
10 13:0.158418123098
10 14:0.204633165619
11 12:0.131246897228
11 13:0.222510081783
11 14:0.189250624445
12 13:0.205913610145
12 14:0.115393415279
13 14:0.185272215339
</hsp>