sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-5338-5337
X
>3CCM-01521-01520
X
>3GX6-A93-A92
X
>3CCM-01667-01666
X
>3KNI-A1180-A1179
X
>3OHK-A2687-A2686
X
>3CCS-01521-01520
X
>1YHQ-01667-01666
X
>1VQM-01667-01666
X
>1Q82-A1521-A1520
X
>1YHQ-01521-01520
X
>2QA4-01172-01171
X
>3U5D-1662-1661
X
</seq>
<hsp>
0 1:0.642278032889
0 2:0.468557290184
0 3:0.353200295712
0 4:0.796504055109
0 5:0.640549119247
0 6:0.710631987022
0 7:0.458354235082
0 8:0.382800183241
0 9:0.880379806873
0 10:0.784678581703
0 11:0.438945681357
0 12:0.848470300537
1 2:0.801473974698
1 3:0.486500755071
1 4:0.38095047158
1 5:0.282804590455
1 6:0.354458247032
1 7:0.492485672361
1 8:0.559506400586
1 9:0.33301444538
1 10:0.292733757561
1 11:0.504459228362
1 12:0.483794226399
2 3:0.6402117518
2 4:0.875644551422
2 5:0.786124780533
2 6:0.699049838596
2 7:0.713093508762
2 8:0.657702733426
2 9:0.910700884082
2 10:0.833056845138
2 11:0.686852889272
2 12:0.999997711959
3 4:0.593224274785
3 5:0.403285257053
3 6:0.681276312663
3 7:0.118502191754
3 8:0.159160510991
3 9:0.711573693537
3 10:0.648970697665
3 11:0.265449947203
3 12:0.611187899214
4 5:0.386011220487
4 6:0.477943797028
4 7:0.551215126283
4 8:0.595663690613
4 9:0.418697955975
4 10:0.443690841988
4 11:0.58865211292
4 12:0.357327764471
5 6:0.516050629283
5 7:0.379247574398
5 8:0.474693201183
5 9:0.432577033871
5 10:0.377130891191
5 11:0.44496395502
5 12:0.475006427352
6 7:0.703935883601
6 8:0.712149725019
6 9:0.364350044799
6 10:0.294932177259
6 11:0.629660363607
6 12:0.618708006852
7 8:0.158065998409
7 9:0.689599186783
7 10:0.643165635698
7 11:0.2537858877
7 12:0.533196460832
8 9:0.761708275753
8 10:0.696314474987
8 11:0.200096701879
8 12:0.575069581265
9 10:0.178027970292
9 11:0.676449200589
9 12:0.493007195817
10 11:0.593818835271
10 12:0.512572918053
11 12:0.510108798972
</hsp>