sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCE-0731-0687
X
>3I56-0731-0687
X
>1VQN-0731-0687
X
>1Q82-A731-A687
X
>1QVG-0731-0687
X
>3CME-0731-0687
X
>1S72-0731-0687
X
>1VQ9-0731-0687
X
>1K8A-A731-A687
X
>1VQO-0731-0687
X
>1NTA-A5-A6
X
</seq>
<hsp>
0 1:0.417975096969
0 2:0.359792130702
0 3:0.504417049263
0 4:0.582759192857
0 5:0.277206890186
0 6:0.530709776443
0 7:0.268038853546
0 8:0.551512285034
0 9:0.495391741795
0 10:1.0
1 2:0.561651821716
1 3:0.296151845328
1 4:0.287396497346
1 5:0.456221220967
1 6:0.415145394236
1 7:0.373677969592
1 8:0.331908630912
1 9:0.608558694249
1 10:0.820014621569
2 3:0.542713495403
2 4:0.693829649442
2 5:0.267765622716
2 6:0.538398755965
2 7:0.305749091807
2 8:0.589693030337
2 9:0.187569155026
2 10:0.85231889706
3 4:0.286677209798
3 5:0.502980366743
3 6:0.29108802612
3 7:0.337466638506
3 8:0.150760999131
3 9:0.519337311891
3 10:0.833352182244
4 5:0.578143878144
4 6:0.284351584991
4 7:0.448562071652
4 8:0.212101401854
4 9:0.681871527252
4 10:0.783577966164
5 6:0.472622471748
5 7:0.258904176997
5 8:0.516780762796
5 9:0.344046608051
5 10:0.800326357383
6 7:0.35395464878
6 8:0.215099779414
6 9:0.498535359488
6 10:0.7714106835
7 8:0.360492538145
7 9:0.334966751696
7 10:0.822093455419
8 9:0.54724393425
8 10:0.779515289044
9 10:0.755470642362
</hsp>