sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A2721-A2620
X
>3OH5-A2721-A2620
X
>3OI1-A2721-A2620
X
>3OHZ-A2721-A2620
X
>3OHK-A2721-A2620
X
>3OHJ-A2721-A2620
X
>2J03-A2768-A2667
X
>2J01-A2768-A2667
X
</seq>
<hsp>
0 1:0.0626271238648
0 2:0.586484790271
0 3:0.588732528573
0 4:0.541890485059
0 5:0.537276595767
0 6:0.988946655456
0 7:1.0
1 2:0.592775487622
1 3:0.59094007957
1 4:0.531134999134
1 5:0.524709045033
1 6:0.96956648948
1 7:0.980806439668
2 3:0.059366147453
2 4:0.582502460752
2 5:0.581713342931
2 6:0.774162941544
2 7:0.774325615713
3 4:0.58148743551
3 5:0.57921717179
3 6:0.729851174101
3 7:0.72950584337
4 5:0.0573115482024
4 6:0.88380577787
4 7:0.905183678899
5 6:0.877094914373
5 7:0.898224162814
6 7:0.0448292923336
</hsp>