sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3PDR-X16-X94
X
>2QBZ-X16-X94
X
>3D2G-B59-B58
X
>1Q86-A1278-A505
X
>3CXC-01278-0505
X
>1N8R-A1278-A505
X
>3KNK-A1168-A524
X
>3OHC-A172-A213
X
>3OGE-A172-A213
X
>3OGY-A172-A213
X
>3OHY-A172-A213
X
>3OI0-A172-A213
X
</seq>
<hsp>
0 1:0.113783269898
0 2:0.961096802097
0 3:0.419921092161
0 4:0.417064874628
0 5:0.435717306219
0 6:0.647630521965
0 7:0.727964796607
0 8:0.814046591571
0 9:0.806427979105
0 10:0.829336659331
0 11:0.828210814039
1 2:1.0
1 3:0.500831392193
1 4:0.497532792171
1 5:0.510842574678
1 6:0.700579818551
1 7:0.769356747898
1 8:0.852258445947
1 9:0.844494220203
1 10:0.866137258476
1 11:0.865107251354
2 3:0.869580231797
2 4:0.862675833861
2 5:0.896559922692
2 6:0.794248815704
2 7:0.614709980355
2 8:0.657169987334
2 9:0.657435421911
2 10:0.584240936376
2 11:0.580985013203
3 4:0.041340421827
3 5:0.0569172106503
3 6:0.303908231496
3 7:0.47873125228
3 8:0.551470741775
3 9:0.543502371898
3 10:0.589814975288
3 11:0.588811910881
4 5:0.0813671185879
4 6:0.311557558181
4 7:0.4741126018
4 8:0.554165843434
4 9:0.545851396058
4 10:0.587688960748
4 11:0.586333909266
5 6:0.296663763316
5 7:0.493241998622
5 8:0.557592816161
5 9:0.549557247336
5 10:0.600899553538
5 11:0.600244809759
6 7:0.265311602911
6 8:0.288872854123
6 9:0.281161819431
6 10:0.355287946172
6 11:0.355589366267
7 8:0.132866503445
7 9:0.125205057045
7 10:0.13110344074
7 11:0.128705887011
8 9:0.0121021603882
8 10:0.106598246895
8 11:0.109852515683
9 10:0.106662795376
9 11:0.109455482558
10 11:0.00770537589808
</hsp>