sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-3109-311
X
>3U5H-7109-711
X
>3R8S-B105-B13
X
>3OH5-B106-B13
X
>3OH7-B106-B13
X
>1ET4-E9-E26
X
>3OHZ-B106-B13
X
>3OI1-B106-B13
X
>3OHK-B106-B13
X
>3F1H-B106-B13
X
>3F1F-B106-B13
X
</seq>
<hsp>
0 1:0.0383188339188
0 2:0.179919672522
0 3:0.433851580617
0 4:0.430946207498
0 5:0.950970769224
0 6:0.361810277414
0 7:0.36472109721
0 8:0.339840338745
0 9:0.382567832633
0 10:0.386839857969
1 2:0.165413815572
1 3:0.441321546267
1 4:0.439387268992
1 5:0.946007165066
1 6:0.371421786327
1 7:0.375413969517
1 8:0.349962013467
1 9:0.394880729091
1 10:0.398951175739
2 3:0.492862073967
2 4:0.492731632139
2 5:0.854120196353
2 6:0.432382470525
2 7:0.436605792981
2 8:0.402223685317
2 9:0.456833202213
2 10:0.459798886384
3 4:0.014920936879
3 5:0.994202565756
3 6:0.0987464677441
3 7:0.0978929256254
3 8:0.137658800969
3 9:0.0977655472595
3 10:0.0940236201916
4 5:1.0
4 6:0.09593704195
4 7:0.0929820640057
4 8:0.133742100744
4 9:0.0930409865701
4 10:0.0894211208841
5 6:0.978130198217
5 7:0.982588336605
5 8:0.960566893251
5 9:0.976423228486
5 10:0.977577992918
6 7:0.0158675391186
6 8:0.0660493256889
6 9:0.0554524705672
6 10:0.0561353082379
7 8:0.0644881516725
7 9:0.0503861472814
7 10:0.0510060519941
8 9:0.103629121357
8 10:0.104389989945
9 10:0.0073308812004
</hsp>