sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUB-A172-A213
X
>1N32-A172-A213
X
>2UXC-A172-A213
X
>1XMQ-A172-A213
X
>2VQF-A172-A213
X
>1FJG-A172-A213
X
>2VQE-A172-A213
X
>3KNH-A163-A204
X
</seq>
<hsp>
0 1:0.244588334068
0 2:0.24048045756
0 3:0.565898628772
0 4:0.465841024462
0 5:0.348664024061
0 6:0.407778587984
0 7:0.9999923024
1 2:0.244509515337
1 3:0.518759086402
1 4:0.437554600894
1 5:0.357994902996
1 6:0.350721081878
1 7:0.966196896397
2 3:0.519923601727
2 4:0.327095973269
2 5:0.314486047502
2 6:0.301320287082
2 7:0.938961342219
3 4:0.358149592664
3 5:0.251003552793
3 6:0.364113193575
3 7:0.640249115636
4 5:0.295362790558
4 6:0.1637185435
4 7:0.780522076192
5 6:0.269564474716
5 7:0.724727784935
6 7:0.758727056348
</hsp>