sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A639-A650
X
>3U5F-6591-6543
X
>3F1F-A648-A659
X
>1NJI-A1254-A919
X
>3CPW-01254-0919
X
>3F1H-A648-A659
X
>3OHJ-A1138-A847
X
>3OHK-A1138-A847
X
</seq>
<hsp>
0 1:0.89671557585
0 2:0.645141377376
0 3:0.741639309571
0 4:0.699153031956
0 5:0.64826285873
0 6:0.876902078955
0 7:1.0
1 2:0.558784481928
1 3:0.812250694585
1 4:0.767535034105
1 5:0.564484859952
1 6:0.640867935913
1 7:0.712443433322
2 3:0.770658644129
2 4:0.718842569321
2 5:0.0418407358788
2 6:0.78029777054
2 7:0.862718672498
3 4:0.125682352822
3 5:0.754279612543
3 6:0.396724064114
3 7:0.501783017278
4 5:0.701616160326
4 6:0.414930482635
4 7:0.536698378006
5 6:0.764462809347
5 7:0.84533932412
6 7:0.169855898862
</hsp>