sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J03-A2128-A1980
X
>2J01-A2128-A1980
X
>3R8S-A2244-A2057
X
>3R8N-A849-A742
X
>3KNI-A2156-A1979
X
>3R8T-A2243-A2056
X
>1VQ9-02130-02051
X
>3CXC-02130-02051
X
>1VQL-02130-02051
X
>1VQP-02130-02051
X
>1VQ7-02130-02051
X
>1VQ8-02130-02051
X
>1VQ4-02130-02051
X
>3U5D-12371-12213
X
>1VQM-02130-02051
X
>1VQ5-02130-02051
X
>1M90-A2130-A2051
X
</seq>
<hsp>
0 1:0.0144860140401
0 2:0.233542606983
0 3:0.963060329169
0 4:0.211056396592
0 5:0.132524540751
0 6:0.195312008267
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0 8:0.185105383324
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0 10:0.191771289031
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0 12:0.227640757174
0 13:0.173195977288
0 14:0.195507755132
0 15:0.211093384104
0 16:0.229131424813
1 2:0.231498306896
1 3:0.969220218267
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1 8:0.185000997665
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1 11:0.182518611006
1 12:0.229149935477
1 13:0.170407304699
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1 15:0.212987849428
1 16:0.228365283944
2 3:1.0
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3 4:0.89802255555
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3 6:0.882540036807
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3 11:0.901034895888
3 12:0.847401555163
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7 8:0.107342370922
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8 9:0.0285910011557
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10 11:0.0634402604866
10 12:0.0683138739273
10 13:0.16773963279
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10 15:0.0790647960264
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11 12:0.0733541760833
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12 13:0.187923348231
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13 15:0.156795693718
13 16:0.14935638553
14 15:0.0604957199745
14 16:0.0794762814705
15 16:0.0924004085162
</hsp>