sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A522-A23
X
>3F1E-A502-A20
X
>3F1G-A502-A20
X
>3OGE-A502-A20
X
>3OGY-A502-A20
X
>3OHD-A502-A20
X
>3OHC-A502-A20
X
>3U5B-21522-21452
X
>3OI0-A502-A20
X
>3OHY-A502-A20
X
>3R8N-A522-A23
X
>2ZJR-X682-X680
X
</seq>
<hsp>
0 1:0.163931304184
0 2:0.158020065502
0 3:0.231015449171
0 4:0.221842733947
0 5:0.298786818082
0 6:0.300112443639
0 7:0.222530208482
0 8:0.281670269146
0 9:0.280137068085
0 10:0.263977749855
0 11:0.969267785499
1 2:0.00993681788428
1 3:0.223697921602
1 4:0.223065483408
1 5:0.238291293406
1 6:0.238075203475
1 7:0.319808157479
1 8:0.268310839795
1 9:0.263392524159
1 10:0.183669376708
1 11:0.999999055038
2 3:0.222227579302
2 4:0.221076262469
2 5:0.239196280089
2 6:0.239513351698
2 7:0.314791803565
2 8:0.266845447699
2 9:0.262234706928
2 10:0.184938856942
2 11:0.99676135577
3 4:0.0190955259947
3 5:0.099973020772
3 6:0.10475140108
3 7:0.430703183347
3 8:0.0781552853638
3 9:0.0738185351574
3 10:0.143899986299
3 11:0.966933039969
4 5:0.111853926705
4 6:0.117766113037
4 7:0.420870883048
4 8:0.0782279982439
4 9:0.0759857246135
4 10:0.152814485943
4 11:0.964837534526
5 6:0.022436099064
5 7:0.497016682164
5 8:0.096702500982
5 9:0.0874572642269
5 10:0.105361657253
5 11:0.982529447764
6 7:0.496835610028
6 8:0.107534232194
6 9:0.096654428497
6 10:0.101754933035
6 11:0.983924000951
7 8:0.47693636894
7 9:0.476049057389
7 10:0.451986403069
7 11:0.98807864699
8 9:0.014331400681
8 10:0.170878774054
8 11:0.966367376326
9 10:0.161637826768
9 11:0.965609885899
10 11:0.930642567505
</hsp>