sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1899-A1872
X
>3OHJ-A1900-A1873
X
>3OH5-A1900-A1873
X
>3OI1-A1900-A1873
X
>3OH7-A1900-A1873
X
>3CCS-02109-0391
X
>3OHZ-A1900-A1873
X
>3OHK-A1900-A1873
X
>3R1C-M6-T4
X
>3CCJ-02109-0391
X
>2G3S-C3-I2
X
</seq>
<hsp>
0 1:0.346512487703
0 2:0.411888447931
0 3:0.440135797889
0 4:0.422970133912
0 5:0.632388759962
0 6:0.437187165494
0 7:0.367306569522
0 8:0.669662738863
0 9:0.747956079799
0 10:0.426403733583
1 2:0.1615710995
1 3:0.230054951784
1 4:0.14854288453
1 5:0.621948955183
1 6:0.238069456398
1 7:0.060501992554
1 8:0.598789647705
1 9:0.817682791104
1 10:0.519533833926
2 3:0.219085788288
2 4:0.0638734429971
2 5:0.641960598466
2 6:0.20455328894
2 7:0.184281324507
2 8:0.636598420344
2 9:0.775182980409
2 10:0.482452497299
3 4:0.221133458442
3 5:0.448532516393
3 6:0.0675369663394
3 7:0.245172026402
3 8:0.553132966538
3 9:0.666035358938
3 10:0.448622438202
4 5:0.645492410612
4 6:0.218761031659
4 7:0.158754847673
4 8:0.617487546
4 9:0.809396916423
4 10:0.505201862064
5 6:0.462445646263
5 7:0.631908070916
5 8:0.619418290013
5 9:0.523203472042
5 10:0.520700972133
6 7:0.261363679497
6 8:0.553516617022
6 9:0.651558167863
6 10:0.423196708604
7 8:0.613302991346
7 9:0.841234094586
7 10:0.545091738456
8 9:0.999993959109
8 10:0.641954722074
9 10:0.56448393137
</hsp>