sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1075-A1025
X
>3KNK-A1074-A1024
X
>3OHK-A1069-A1019
X
>2J01-A1069-A1019
X
>2J03-A1069-A1019
X
>3OHJ-A1069-A1019
X
>1ZL3-B11-B10
X
>1K8W-B11-B10
X
</seq>
<hsp>
0 1:0.0717443954989
0 2:0.0762584141012
0 3:0.0930071095469
0 4:0.0921668959266
0 5:0.0858564524794
0 6:0.889055373396
0 7:0.970992556064
1 2:0.0729654721712
1 3:0.0761705693704
1 4:0.0756852856985
1 5:0.0851877234477
1 6:0.885504712834
1 7:0.968371936646
2 3:0.0376167203622
2 4:0.0344152420422
2 5:0.0174600018282
2 6:0.898304979233
2 7:0.978695770899
3 4:0.00702115870055
3 5:0.0386674254188
3 6:0.918900336601
3 7:0.999999925613
4 5:0.0342845569112
4 6:0.913635676376
4 7:0.994695360687
5 6:0.895595653589
5 7:0.975681325463
6 7:0.0916341019478
</hsp>