sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A829-A805
X
>3R8T-A829-A805
X
>3OHZ-A838-A814
X
>3OH5-A838-A814
X
>3OHJ-A838-A814
X
>3OI1-A838-A814
X
>3OH7-A838-A814
X
>2ZJR-X764-X740
X
</seq>
<hsp>
0 1:0.353106887966
0 2:0.428804454856
0 3:0.250443992181
0 4:0.356622291894
0 5:0.450869464595
0 6:0.282528018531
0 7:0.952132311797
1 2:0.501669288337
1 3:0.499035301052
1 4:0.460255740642
1 5:0.490285454408
1 6:0.513228641943
1 7:1.0
2 3:0.322630206842
2 4:0.175999700435
2 5:0.0820640781137
2 6:0.306716515135
2 7:0.6864092863
3 4:0.251400129789
3 5:0.350045385527
3 6:0.058400733668
3 7:0.763963910831
4 5:0.199104306369
4 6:0.247665948094
4 7:0.722472208355
5 6:0.328217321
5 7:0.688511687952
6 7:0.737312701395
</hsp>