sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZZM-B18-B69
X
>2ZUF-B18-B59
X
>3OHJ-A756-A754
X
>3OHK-A756-A754
X
>2TRA-A16-A56
X
>3OHZ-A756-A754
X
>2FMT-D18-D58
X
>3F1E-Z18-Z58
X
>3F1G-Z18-Z58
X
</seq>
<hsp>
0 1:0.0209094892068
0 2:0.984376607989
0 3:0.987984102003
0 4:0.153209424754
0 5:0.988417660389
0 6:0.073719144725
0 7:0.0712915226604
0 8:0.0708019388917
1 2:0.995732481855
1 3:0.999424147948
1 4:0.159490763241
1 5:1.0
1 6:0.0828280413774
1 7:0.076311096968
1 8:0.0759376622475
2 3:0.0114358895272
2 4:0.890135941013
2 5:0.0346883349499
2 6:0.956792256231
2 7:0.964620895586
2 8:0.963736238668
3 4:0.894173179533
3 5:0.0365173509289
3 6:0.960559747167
3 7:0.968475217887
3 8:0.967591385223
4 5:0.893708747141
4 6:0.125240431312
4 7:0.115903497567
4 8:0.115189972883
5 6:0.959506860608
5 7:0.969133197144
5 8:0.968251190145
6 7:0.054093426161
6 8:0.0538463660526
7 8:0.00134707406619
</hsp>