sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1750-A1885
X
>3R8N-A1524-A813
X
>2UUA-A1498-A793
X
>3U5H-51996-52124
X
>3F1G-A1498-A793
X
>2J00-A1498-A793
X
>3U5D-11992-12120
X
>3R8S-A1819-A1963
X
</seq>
<hsp>
0 1:0.896664187817
0 2:0.799839553054
0 3:0.255430009107
0 4:0.968560551296
0 5:0.77815672436
0 6:0.256664884429
0 7:0.254994267938
1 2:0.199286731568
1 3:0.921278400176
1 4:0.300488208264
1 5:0.252248449539
1 6:0.930718466787
1 7:0.9761022653
2 3:0.808452529725
2 4:0.230124704353
2 5:0.129879815172
2 6:0.804388563832
2 7:0.855236098427
3 4:0.95922275615
3 5:0.798566154597
3 6:0.183388646215
3 7:0.230110505287
4 5:0.259877026494
4 6:0.939702244159
4 7:1.0
5 6:0.799336346105
5 7:0.850526936045
6 7:0.146761073613
</hsp>