sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X1894-X502
X
>3CCL-01787-01964
X
>3CCM-01787-01964
X
>2QEX-01787-01964
X
>3CME-01787-01964
X
>3CCJ-01787-01964
X
>2J03-A1698-A1893
X
>2J01-A1698-A1893
X
</seq>
<hsp>
0 1:0.70516564035
0 2:0.762078887579
0 3:0.766002641964
0 4:0.693648555797
0 5:0.999999845917
0 6:0.911374710324
0 7:0.898845144762
1 2:0.229034211465
1 3:0.163655161025
1 4:0.224556818912
1 5:0.401152165496
1 6:0.405013842865
1 7:0.387595989716
2 3:0.218515953559
2 4:0.143157889303
2 5:0.364190640712
2 6:0.29501594823
2 7:0.275311005648
3 4:0.263670151903
3 5:0.359435516779
3 6:0.352080761114
3 7:0.338378402247
4 5:0.361144912051
4 6:0.342226531007
4 7:0.318333670615
5 6:0.43285180027
5 7:0.415274821233
6 7:0.0360663751261
</hsp>