sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ5-01590-01526
X
>1FFK-0753-02009
X
>3CCM-01590-01526
X
>3CCJ-0754-02056
X
>1VQN-01590-01526
X
>3R8T-A456-A451
X
>3OHD-A1411-A309
X
>3F2Q-X100-X32
X
>3SD1-A7-A43
X
</seq>
<hsp>
0 1:0.158834259501
0 2:0.121641112489
0 3:0.313677823448
0 4:0.230717559529
0 5:0.519672554032
0 6:0.58685120787
0 7:0.351504783123
0 8:1.0
1 2:0.190499931583
1 3:0.375939497213
1 4:0.264994598233
1 5:0.592293032339
1 6:0.529569442526
1 7:0.396752981484
1 8:0.999860546658
2 3:0.310757182674
2 4:0.118562969866
2 5:0.484808176517
2 6:0.526373699725
2 7:0.294867602179
2 8:0.945364807226
3 4:0.353583522852
3 5:0.359764075335
3 6:0.640290854932
3 7:0.335302179303
3 8:0.888377491251
4 5:0.479294351567
4 6:0.498440286487
4 7:0.264851908841
4 8:0.882540736979
5 6:0.858310398289
5 7:0.430809302168
5 8:0.73548946188
6 7:0.489830546579
6 8:0.986676785037
7 8:0.70697839856
</hsp>