sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ9-01795-0870
X
>3CME-01795-0870
X
>1VQO-01795-0870
X
>1VQN-01795-0870
X
>1VQL-01795-0870
X
>1VQP-01795-0870
X
>3CPW-01795-0870
X
</seq>
<hsp>
0 1:1.0
0 2:0.509431702406
0 3:0.431232629847
0 4:0.637426667197
0 5:0.766455711209
0 6:0.883682464604
1 2:0.549246797648
1 3:0.725437889197
1 4:0.498758497808
1 5:0.428274330055
1 6:0.329557550078
2 3:0.226842043007
2 4:0.174147747023
2 5:0.295430237432
2 6:0.402099883978
3 4:0.255985534823
3 5:0.377634075236
3 6:0.508834154051
4 5:0.13522356276
4 6:0.264734999791
5 6:0.14863385162
</hsp>