sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1190-A1167
X
>3CCJ-02513-02650
X
>3KNH-A1430-A1401
X
>3G6E-02513-02650
X
>1VQ9-02513-02650
X
>3CCU-02513-02650
X
>1VQK-02513-02650
X
>1VQP-02513-02650
X
>1YIJ-02513-02650
X
>2OTL-02513-02650
X
>1VQL-02513-02650
X
>1Q86-A2513-A2650
X
>1VQ7-02513-02650
X
</seq>
<hsp>
0 1:0.920565728833
0 2:0.462131233578
0 3:1.0
0 4:0.996215893566
0 5:0.99142220238
0 6:0.988134442252
0 7:0.978522017486
0 8:0.968566939969
0 9:0.961269479822
0 10:0.970681117819
0 11:0.972085449198
0 12:0.939063885735
1 2:0.772992443519
1 3:0.122393075127
1 4:0.126216812896
1 5:0.113580154195
1 6:0.119623653878
1 7:0.0988189278791
1 8:0.0829993810295
1 9:0.0924350676859
1 10:0.0956399208481
1 11:0.0947696861837
1 12:0.0703242224446
2 3:0.829313636314
2 4:0.857636976425
2 5:0.818455203707
2 6:0.840500942355
2 7:0.837699350619
2 8:0.813817862657
2 9:0.806292801796
2 10:0.834855690104
2 11:0.837101307082
2 12:0.797406068789
3 4:0.0775467989595
3 5:0.0284959850995
3 6:0.0767343860859
3 7:0.0853623956147
3 8:0.0677571277865
3 9:0.106922827936
3 10:0.0902184358062
3 11:0.124069549314
3 12:0.126694531889
4 5:0.079010111363
4 6:0.0418042108941
4 7:0.0530826288369
4 8:0.0713021960745
4 9:0.115244573812
4 10:0.0395440911101
4 11:0.104594578575
4 12:0.117115583006
5 6:0.0645967416655
5 7:0.0782099487791
5 8:0.0575984977129
5 9:0.0995332206694
5 10:0.0829659256045
5 11:0.119419862105
5 12:0.113964195071
6 7:0.0418362755656
6 8:0.0560774419773
6 9:0.100333673933
6 10:0.0426913636856
6 11:0.100502294493
6 12:0.0995699212618
7 8:0.0378046833619
7 9:0.0701631404727
7 10:0.0414785632622
7 11:0.0605057056083
7 12:0.0682918919649
8 9:0.051469753805
8 10:0.0589585508844
8 11:0.0684564694701
8 12:0.0641222406999
9 10:0.101782907445
9 11:0.0559738409113
9 12:0.0544337435186
10 11:0.0880235661268
10 12:0.0893217613367
11 12:0.0515027892857
</hsp>