sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1XMQ-A33-A387
X
>2QA4-02015-02019
X
>2QEX-02016-02020
X
>2QA4-01722-01735
X
>1M90-A1723-A1736
X
>1N8R-A1723-A1736
X
>3OI0-A1337-A950
X
>3OHY-A1337-A950
X
</seq>
<hsp>
0 1:0.435961380787
0 2:0.442549963798
0 3:0.991009555277
0 4:1.0
0 5:0.995691822936
0 6:0.646083704472
0 7:0.644370604707
1 2:0.0261624156384
1 3:0.767521144345
1 4:0.778406532033
1 5:0.773911662447
1 6:0.39145684886
1 7:0.389933194525
2 3:0.757941011702
2 4:0.768465978882
2 5:0.764097334151
2 6:0.382505345582
2 7:0.381012610013
3 4:0.0377204695253
3 5:0.0340482541826
3 6:0.424469383532
3 7:0.426899401581
4 5:0.0152887209163
4 6:0.42826604086
4 7:0.43062466644
5 6:0.424956989365
5 7:0.427367738053
6 7:0.00380752097311
</hsp>