sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-A916-A1314
X
>3F1E-A916-A1314
X
>3R8N-A942-A1336
X
>3U5B-21151-21557
X
>3OHD-A916-A1314
X
>3OHC-A916-A1314
X
>3OHY-A916-A1314
X
>3OI0-A916-A1314
X
>3OGY-A916-A1314
X
>3OGE-A916-A1314
X
</seq>
<hsp>
0 1:0.0222440808563
0 2:0.584848302178
0 3:0.368514173636
0 4:0.358896111393
0 5:0.359500005462
0 6:0.293513804263
0 7:0.295356978145
0 8:0.503165777648
0 9:0.50268947269
1 2:0.59014755769
1 3:0.357467911759
1 4:0.351269829129
1 5:0.351897892834
1 6:0.284830203073
1 7:0.286710772123
1 8:0.498042999226
1 9:0.497392836506
2 3:0.509628311125
2 4:0.816444634838
2 5:0.821424027885
2 6:0.795160053127
2 7:0.795895272088
2 8:0.998816576477
2 9:1.0
3 4:0.520359107616
3 5:0.523313379143
3 6:0.458811811594
3 7:0.458984955039
3 8:0.730060106874
3 9:0.72900851336
4 5:0.00960673540069
4 6:0.224101522226
4 7:0.225820218454
4 8:0.287822856707
4 9:0.287854975787
5 6:0.223963806308
5 7:0.225843423743
5 8:0.281733796351
5 9:0.281656535209
6 7:0.00938650483254
6 8:0.433104905209
6 9:0.431439370793
7 8:0.435978692913
7 9:0.43444175978
8 9:0.0100232271532
</hsp>