sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-11918-13085
X
>3U5H-51922-53086
X
>3OI1-A116-A109
X
>3OHZ-A116-A109
X
>3OHJ-A116-A109
X
>3OHK-A116-A109
X
>3OH7-A116-A109
X
>3OH5-A116-A109
X
</seq>
<hsp>
0 1:0.0323055641111
0 2:0.999999643113
0 3:0.99118526817
0 4:0.980150473189
0 5:0.97925920705
0 6:0.979810907329
0 7:0.980184148958
1 2:0.994099997079
1 3:0.984868260158
1 4:0.973367762893
1 5:0.972926414621
1 6:0.973094850534
1 7:0.973168546205
2 3:0.0169297313417
2 4:0.0733918447751
2 5:0.0747175560483
2 6:0.0747661056373
2 7:0.0725035951278
3 4:0.0676103882303
3 5:0.0713069556315
3 6:0.0729639323283
3 7:0.0688464718005
4 5:0.0181675516943
4 6:0.0490931305781
4 7:0.0468612748334
5 6:0.0422789775017
5 7:0.0433390489044
6 7:0.0114539371686
</hsp>