sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J02-A565-A732
X
>2J00-A565-A732
X
>1G1X-D5-E38
X
>3R8N-A585-A752
X
>3F1E-A565-A732
X
>3F1G-A565-A732
X
>1XMQ-A565-A732
X
>2VQF-A565-A732
X
>1N32-A565-A732
X
>2UUB-A565-A732
X
>2VQE-A565-A732
X
>1FJG-A565-A732
X
</seq>
<hsp>
0 1:0.0311093363182
0 2:0.855173462877
0 3:0.590717003208
0 4:0.607139808305
0 5:0.612711814164
0 6:0.500326422744
0 7:0.553155553255
0 8:0.705972550831
0 9:0.60153352373
0 10:0.545277529864
0 11:0.615317169059
1 2:0.846726712318
1 3:0.59588517544
1 4:0.605064443682
1 5:0.610735262414
1 6:0.502379403511
1 7:0.555599120407
1 8:0.713850685996
1 9:0.60103656494
1 10:0.5470626881
1 11:0.618627635404
2 3:0.632122407947
2 4:0.737042801075
2 5:0.734946831781
2 6:0.870760815607
2 7:0.880988963148
2 8:1.0
2 9:0.809161047406
2 10:0.927660455104
2 11:0.841179687186
3 4:0.387214875043
3 5:0.386462120967
3 6:0.400802338098
3 7:0.378198618112
3 8:0.440102219168
3 9:0.386257527588
3 10:0.434539058956
3 11:0.327840185114
4 5:0.0139908179907
4 6:0.384847304625
4 7:0.411753979788
4 8:0.454452603822
4 9:0.32494665928
4 10:0.361029414549
4 11:0.370239036306
5 6:0.386116291495
5 7:0.412403446841
5 8:0.453361609892
5 9:0.322933446427
5 10:0.362866011926
5 11:0.369264239684
6 7:0.133799854927
6 8:0.255665456537
6 9:0.176979059336
6 10:0.109385345703
6 11:0.167758291825
7 8:0.236954409397
7 9:0.173979545262
7 10:0.138020170009
7 11:0.136076910195
8 9:0.283011009967
8 10:0.228486888859
8 11:0.185253298654
9 10:0.189983672834
9 11:0.149992884582
10 11:0.183656431574
</hsp>