sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCR-02193-02177
X
>2J01-A1248-A1581
X
>2J03-A1248-A1581
X
>2QA4-0706-0694
X
>3OHY-A948-A1339
X
>3OI0-A948-A1339
X
>3OGE-A948-A1339
X
>3OGY-A948-A1339
X
>2J00-A948-A1339
X
</seq>
<hsp>
0 1:0.415238108297
0 2:0.417720738501
0 3:0.203033492578
0 4:0.958797634621
0 5:0.959391475924
0 6:1.0
0 7:0.998689948919
0 8:0.920938486238
1 2:0.0114475071088
1 3:0.392734306294
1 4:0.892328344872
1 5:0.892929066064
1 6:0.94450735899
1 7:0.944038254474
1 8:0.855090961672
2 3:0.391457638065
2 4:0.884505427787
2 5:0.88510483288
2 6:0.936788428678
2 7:0.936332833014
2 8:0.848294792584
3 4:0.785504454986
3 5:0.786325705866
3 6:0.827227230205
3 7:0.826358294474
3 8:0.774627059494
4 5:0.00356615600027
4 6:0.072566756469
4 7:0.0719612623329
4 8:0.222482669715
5 6:0.0726314501202
5 7:0.0718345103095
5 8:0.220612300416
6 7:0.00562475532506
6 8:0.250462035517
7 8:0.246250961177
</hsp>