sequences=19
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1F-A410-A408
X
>3F1H-A410-A408
X
>3KNH-A907-A1305
X
>3OHJ-A403-A401
X
>3OHK-A403-A401
X
>3OHZ-A403-A401
X
>3OI1-A403-A401
X
>3OH7-A403-A401
X
>3OH5-A403-A401
X
>3R8N-A867-A857
X
>3R8O-A303-A290
X
>3F1E-A705-A708
X
>3R8O-A725-A728
X
>2UXC-A705-A708
X
>2UUA-A705-A708
X
>2ZZM-B50-B53
X
>2VQF-A705-A708
X
>2VQE-A705-A708
X
>1FJG-A705-A708
X
</seq>
<hsp>
0 1:0.00547026591793
0 2:0.931700884739
0 3:0.0476012843187
0 4:0.0381294558536
0 5:0.0421001365626
0 6:0.0374976548529
0 7:0.0413411556158
0 8:0.0469252939376
0 9:0.966426163826
0 10:0.800910337298
0 11:0.812627276013
0 12:0.818792279323
0 13:0.82630953852
0 14:0.815869987426
0 15:0.820078474943
0 16:0.825998650012
0 17:0.812735379189
0 18:0.819191636894
1 2:0.93352279758
1 3:0.0466801150741
1 4:0.0370958321317
1 5:0.0411571326265
1 6:0.0360554527724
1 7:0.038948755157
1 8:0.0450544827942
1 9:0.967998378118
1 10:0.802057933531
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1 15:0.821423115067
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1 18:0.820355397995
2 3:0.960876971419
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2 15:0.2869778756
2 16:0.364395886172
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2 18:0.376660907697
3 4:0.0163652618165
3 5:0.0181544309991
3 6:0.0240504414928
3 7:0.0347841339139
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3 17:0.831733891018
3 18:0.83708352225
4 5:0.0163581672602
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5 6:0.013013266665
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5 12:0.832784852847
5 13:0.838581097954
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5 15:0.837028309428
5 16:0.837659008732
5 17:0.824902664375
5 18:0.830208428855
6 7:0.0230271223967
6 8:0.0220123404694
6 9:0.987787935011
6 10:0.814960177236
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6 16:0.8375812655
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7 8:0.01590879877
7 9:0.995669310358
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7 11:0.831874059733
7 12:0.84147773105
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7 15:0.843977053209
7 16:0.846620521217
7 17:0.833449030805
7 18:0.839181705555
8 9:1.0
8 10:0.824311778342
8 11:0.831973196593
8 12:0.842406150273
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10 11:0.149415545707
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11 12:0.0924796244091
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11 18:0.0406309733783
12 13:0.0585152815417
12 14:0.0614917431111
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12 16:0.0666895050514
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13 14:0.0185314045842
13 15:0.151239677666
13 16:0.0231082410838
13 17:0.0307011379729
13 18:0.0380018949934
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14 18:0.0327083481838
15 16:0.150852291939
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16 17:0.0245386258129
16 18:0.0247905639096
17 18:0.0258862676129
</hsp>