sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01680-01334
X
>1YJ9-01681-01335
X
>3F1F-A1267-A471
X
>3U5H-52935-52942
X
>3U5D-12934-12941
X
>3R8T-A1241-A449
X
>3R8S-A1241-A449
X
>3OHJ-A1197-A464
X
>3OHK-A1197-A464
X
>3OH5-A1197-A464
X
>3OHZ-A1197-A464
X
>2J01-A1197-A464
X
>2J03-A1197-A464
X
</seq>
<hsp>
0 1:0.0843849022753
0 2:0.844319810703
0 3:0.695544523553
0 4:0.745429776294
0 5:0.940664450893
0 6:1.0
0 7:0.918856926357
0 8:0.90344279394
0 9:0.884636223022
0 10:0.907976986782
0 11:0.91963290427
0 12:0.935484368053
1 2:0.820680778267
1 3:0.682261108342
1 4:0.732459504543
1 5:0.913740232827
1 6:0.973570292498
1 7:0.895128500692
1 8:0.879049410517
1 9:0.859890166572
1 10:0.88752331623
1 11:0.897826897888
1 12:0.91354312072
2 3:0.606079521939
2 4:0.619424518138
2 5:0.17023311696
2 6:0.210757266749
2 7:0.203444507755
2 8:0.183140046408
2 9:0.154971175987
2 10:0.169198902593
2 11:0.160804692479
2 12:0.168973337358
3 4:0.0687921465009
3 5:0.686833876841
3 6:0.753731352743
3 7:0.696857993478
3 8:0.673176734313
3 9:0.677841677545
3 10:0.680479417212
3 11:0.647771797509
3 12:0.658604653205
4 5:0.687515878621
4 6:0.752776411853
4 7:0.699320563138
4 8:0.676904621769
4 9:0.683315649962
4 10:0.685013927737
4 11:0.646312283091
4 12:0.656340736911
5 6:0.102255579872
5 7:0.103796122621
5 8:0.102384238322
5 9:0.0884914958959
5 10:0.106850157462
5 11:0.0808603852985
5 12:0.077033460953
6 7:0.16104643414
6 8:0.17097162128
6 9:0.147850721449
6 10:0.15739337428
6 11:0.135797229577
6 12:0.126430863694
7 8:0.0352439548974
7 9:0.0632177512599
7 10:0.0678233070999
7 11:0.110927909954
7 12:0.111301418646
8 9:0.0556291995024
8 10:0.0676388181159
8 11:0.106631172208
8 12:0.109331828504
9 10:0.0691917194214
9 11:0.0940042476698
9 12:0.0996970023241
10 11:0.103516693559
10 12:0.105152606107
11 12:0.0196931360594
</hsp>