sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A321-A55
X
>3F1G-A321-A55
X
>3F1E-A321-A55
X
>2J00-A321-A55
X
>1XMQ-A321-A55
X
>2VQF-A321-A55
X
>2UXC-A321-A55
X
>2J02-A554-A737
X
>2J00-A554-A737
X
>2UUB-A321-A55
X
>1ZHO-F10-F26
X
>3F1G-A554-A737
X
</seq>
<hsp>
0 1:0.0631123030446
0 2:0.0645857293737
0 3:0.0658800071777
0 4:0.0835089272716
0 5:0.0909091874046
0 6:0.07713533938
0 7:0.997917185563
0 8:1.0
0 9:0.114173627691
0 10:0.932235747456
0 11:0.958563662472
1 2:0.00460852226585
1 3:0.0305416529606
1 4:0.0678396536654
1 5:0.0561802420729
1 6:0.0605205998303
1 7:0.970058224926
1 8:0.972027669445
1 9:0.0876193850518
1 10:0.906226178263
1 11:0.931114993217
2 3:0.0315414880268
2 4:0.0662741114295
2 5:0.0548326878374
2 6:0.0593640920436
2 7:0.969199817444
2 8:0.971160378649
2 9:0.0870293567416
2 10:0.905587135039
2 11:0.930233646239
3 4:0.0808765436896
3 5:0.0735893259457
3 6:0.0779009453588
3 7:0.992103418461
3 8:0.99400392096
3 9:0.109630054902
3 10:0.928554195262
3 11:0.951828503539
4 5:0.0402940802864
4 6:0.0180576709907
4 7:0.962504283273
4 8:0.964606507695
4 9:0.0582273498187
4 10:0.896536064341
4 11:0.925578351117
5 6:0.0369162757676
5 7:0.96091036136
5 8:0.963019632575
5 9:0.0586937495632
5 10:0.896845476846
5 11:0.924642228803
6 7:0.955152904439
6 8:0.957269922148
6 9:0.0494610859598
6 10:0.888868400333
6 11:0.918403794038
7 8:0.006465716556
7 9:0.917048389635
7 10:0.142112275345
7 11:0.0843632620497
8 9:0.91931911558
8 10:0.145731962908
8 11:0.0830823285267
9 10:0.848148949778
9 11:0.882171006199
10 11:0.170109625943
</hsp>