sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FJG-A495-A511
X
>3R8T-B67-B13
X
>3R8S-A584-A1246
X
>3OHK-A594-A1202
X
>3OHJ-A594-A1202
X
>1VQP-0630-01316
X
>1VQ9-0630-01316
X
>3OH7-A594-A1202
X
</seq>
<hsp>
0 1:0.849378745225
0 2:1.0
0 3:0.991690040488
0 4:0.990775722096
0 5:0.948626922664
0 6:0.945528124755
0 7:0.991026134828
1 2:0.351787257441
1 3:0.348434445606
1 4:0.349440941633
1 5:0.314147602484
1 6:0.310614759451
1 7:0.345678178502
2 3:0.0546371706356
2 4:0.0545717074178
2 5:0.0983918736737
2 6:0.107620814292
2 7:0.0460967762055
3 4:0.00972433723175
3 5:0.0901930590224
3 6:0.101113225958
3 7:0.0219563413487
4 5:0.0904652154386
4 6:0.102196663124
4 7:0.0225116853332
5 6:0.0163068154188
5 7:0.0803690247995
6 7:0.0904854582983
</hsp>