sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2CV0-C55-C16
X
>1N32-A403-A418
X
>1RLG-C5-C18
X
>2CV0-D55-D16
X
>3U5F-61249-61223
X
>4TNA-A56-A17
X
>1EFW-C57-C17
X
>3KNI-A734-A712
X
>2ZM5-C56-C17
X
>3L0U-A56-A17
X
>3KFU-M54-M15
X
>3KFU-N54-N15
X
>1GTS-B54-B15
X
>3HAX-E23-E31
X
>3Q3Z-A49-A13
X
>1C0A-B57-B17
X
</seq>
<hsp>
0 1:0.963015184453
0 2:0.254603287923
0 3:0.0833372264899
0 4:0.140249814032
0 5:0.125836577986
0 6:0.0984004403418
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0 12:0.161272995466
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0 15:0.236373150618
1 2:0.873454575103
1 3:0.964413044459
1 4:0.952917670022
1 5:0.929063887631
1 6:1.0
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1 10:0.981648886574
1 11:0.981560797235
1 12:0.981633664713
1 13:0.924125492525
1 14:0.903263887954
1 15:0.994597056948
2 3:0.229213086719
2 4:0.189917512895
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3 4:0.155606801076
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3 15:0.226637867088
4 5:0.147429917114
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5 6:0.153669672004
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7 12:0.106440262721
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8 9:0.164885229246
8 10:0.101321518863
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8 12:0.119929052775
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8 15:0.109006167741
9 10:0.167704225268
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10 11:0.00133152150655
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11 12:0.15057292647
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11 15:0.158574870369
12 13:0.148214491572
12 14:0.139226922227
12 15:0.0925145937837
13 14:0.0487192060891
13 15:0.11360707129
14 15:0.132060641074
</hsp>