sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01766-01769
X
>1Q81-A1767-A1770
X
>1QVG-01767-01770
X
>3CXC-01767-01770
X
>1VQ4-01767-01770
X
>3I56-01767-01770
X
>1Q86-A1767-A1770
X
>1YJ9-01767-01770
X
</seq>
<hsp>
0 1:0.680075541676
0 2:0.70238742925
0 3:0.629946725742
0 4:0.872082741567
0 5:0.807073298073
0 6:0.744144781906
0 7:0.999979394963
1 2:0.306905872175
1 3:0.369468293333
1 4:0.407959535273
1 5:0.406445375511
1 6:0.331405448742
1 7:0.599778021626
2 3:0.185337479749
2 4:0.474333196732
2 5:0.282925189378
2 6:0.256937063033
2 7:0.438735375493
3 4:0.527014921079
3 5:0.337907261616
3 6:0.321083386693
3 7:0.403219085795
4 5:0.398023568301
4 6:0.318643988821
4 7:0.565929822141
5 6:0.287315492061
5 7:0.368516652873
6 7:0.479116695537
</hsp>