sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ6-0446-0452
X
>1VQ7-0446-0452
X
>3CCE-0446-0452
X
>3CMA-0446-0452
X
>2OTL-0446-0452
X
>2QA4-0446-0452
X
>1YJ9-0446-0452
X
>1KD1-A446-A452
X
</seq>
<hsp>
0 1:0.152790764844
0 2:0.373351219039
0 3:0.717570344099
0 4:0.258333090101
0 5:0.531674842781
0 6:0.235564577751
0 7:0.393867765749
1 2:0.399883077314
1 3:0.707263137935
1 4:0.197668418053
1 5:0.477095530886
1 6:0.194629800338
1 7:0.303497101295
2 3:0.554584206839
2 4:0.391071504953
2 5:0.71504939526
2 6:0.267582933723
2 7:0.445327389541
3 4:0.73087708933
3 5:1.0
3 6:0.557886450514
3 7:0.745415469428
4 5:0.511082226874
4 6:0.238758154863
4 7:0.174776364254
5 6:0.533179614354
5 7:0.473964882546
6 7:0.28718851655
</hsp>