sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1XMQ-A1161-A1036
X
>2UXC-A1166-A1041
X
>2UUA-A418-A403
X
>3KNH-A499-W34
X
>1NUV-C6-E6
X
>1NUV-E6-C6
X
>1NUJ-E6-C6
X
</seq>
<hsp>
0 1:0.0602532434448
0 2:0.264932116061
0 3:0.832043683542
0 4:0.250992003798
0 5:0.24981921001
0 6:0.246839526402
1 2:0.22619901532
1 3:0.850391188911
1 4:0.23321503359
1 5:0.231164839623
1 6:0.227415757383
2 3:1.0
2 4:0.131502746893
2 5:0.12875966759
2 6:0.136633229867
3 4:0.98082708046
3 5:0.978263342886
3 6:0.971782216218
4 5:0.00760635534054
4 6:0.0331555704882
5 6:0.0322897077251
</hsp>