sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A1134-A973
X
>2J01-A1134-A973
X
>2J02-A508-Y10
X
>3OI1-A1134-A973
X
>2J03-A1134-A973
X
>2J00-A508-Y10
X
>3OHJ-A1134-A973
X
>3OH5-A1134-A973
X
>3OHK-A1134-A973
X
>3OH7-A1134-A973
X
>3U5B-2464-2437
X
>1QVG-02357-02344
X
</seq>
<hsp>
0 1:0.0623530651309
0 2:0.465693143698
0 3:0.0194058928469
0 4:0.0608893558382
0 5:0.435683012616
0 6:0.0483092368887
0 7:0.0413873011365
0 8:0.0600815102223
0 9:0.0523092136444
0 10:0.32505179246
0 11:0.932868968722
1 2:0.469181762855
1 3:0.0662378585863
1 4:0.00459811108924
1 5:0.437584497721
1 6:0.0293390493766
1 7:0.0464491902343
1 8:0.0444161362073
1 9:0.0536322056587
1 10:0.286495581414
1 11:0.90717592408
2 3:0.472762667245
2 4:0.470186104273
2 5:0.0507455735141
2 6:0.476595938321
2 7:0.465104310667
2 8:0.48225161464
2 9:0.469293646395
2 10:0.643349656294
2 11:0.999999980185
3 4:0.0642983799079
3 5:0.44330132504
3 6:0.0454818747159
3 7:0.035646622466
3 8:0.0512475736373
3 9:0.0422061797931
3 10:0.325299847865
3 11:0.937534763837
4 5:0.438500483962
4 6:0.0279417611546
4 7:0.0459264219321
4 8:0.0429046227666
4 9:0.0529519192949
4 10:0.285267902092
4 11:0.905327527248
5 6:0.446174254262
5 7:0.435626444935
5 8:0.45271426981
5 9:0.440356786062
5 10:0.601548464429
5 11:0.973911080665
6 7:0.0253860551298
6 8:0.0215165380269
6 9:0.0305008530419
6 10:0.299529759286
6 11:0.922341881174
7 8:0.0313314380183
7 9:0.0143325344897
7 10:0.316931953421
7 11:0.939643632156
8 9:0.0268313330299
8 10:0.304097793053
8 11:0.92597423775
9 10:0.318956738396
9 11:0.943768784033
10 11:0.755934178085
</hsp>