sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1202-A463
X
>3KNI-A1203-A463
X
>3OH5-A1197-A463
X
>3OHJ-A1197-A463
X
>3OH7-A1197-A463
X
>3OHK-A1197-A463
X
>2ZJR-X1163-X382
X
>3OHZ-A1197-A463
X
>3OI1-A1197-A463
X
>2J01-A1197-A463
X
</seq>
<hsp>
0 1:0.854493230154
0 2:0.815223159689
0 3:0.876230104137
0 4:0.809539567549
0 5:0.844197365633
0 6:0.999998972998
0 7:0.84023633447
0 8:0.842248220718
0 9:0.765230266827
1 2:0.29862119411
1 3:0.292370347029
1 4:0.316066158561
1 5:0.278077651858
1 6:0.32365910055
1 7:0.503425955632
1 8:0.515291478108
1 9:0.606946365827
2 3:0.119314807362
2 4:0.0796783447907
2 5:0.103186664346
2 6:0.424069464628
2 7:0.251996103469
2 8:0.257632151928
2 9:0.465068588485
3 4:0.173044093964
3 5:0.0907627363994
3 6:0.42160804512
3 7:0.287358304746
3 8:0.305890065233
3 9:0.509901399393
4 5:0.115980573248
4 6:0.432956598207
4 7:0.276852512142
4 8:0.269900268164
4 9:0.465329103341
5 6:0.426585897613
5 7:0.306527470782
5 8:0.312145490533
5 9:0.508366127991
6 7:0.506332492667
6 8:0.517130479633
6 9:0.528040099868
7 8:0.0575202833425
7 9:0.337591980663
8 9:0.352782604958
</hsp>