sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A392-A364
X
>3OHY-A524-A477
X
>3OI0-A524-A477
X
>2J03-B96-A919
X
>3OH7-B96-A919
X
>2J02-A524-A477
X
>2QA4-0864-0766
X
>2J01-B96-A919
X
>1Q81-A523-A2008
X
</seq>
<hsp>
0 1:0.690069373519
0 2:0.689979473072
0 3:0.660121127373
0 4:0.664162567379
0 5:0.685711395201
0 6:0.486115020879
0 7:0.646089610292
0 8:0.705780999061
1 2:0.00407697847014
1 3:0.963157085621
1 4:0.946477199421
1 5:0.0297631683135
1 6:0.893917810128
1 7:0.947621751704
1 8:0.998704212159
2 3:0.964532544033
2 4:0.947909209598
2 5:0.0304973929515
2 6:0.894654325888
2 7:0.949007422384
2 8:1.0
3 4:0.0573991072976
3 5:0.956738207051
3 6:0.355727365361
3 7:0.0252785819064
3 8:0.317211292083
4 5:0.940171252889
4 6:0.343553577376
4 7:0.0438342839355
4 8:0.306374862646
5 6:0.885277492812
5 7:0.941489949459
5 8:0.989242617351
6 7:0.343552620861
6 8:0.260576741594
7 8:0.312801096881
</hsp>