sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01940-01971
X
>3CCJ-01941-01972
X
>2OTL-01941-01972
X
>1YJ9-01941-01972
X
>3CD6-01941-01972
X
>1YIJ-01941-01972
X
>3I56-01941-01972
X
>1YIT-01941-01972
X
>1VQ4-01941-01972
X
>1YI2-01941-01972
X
>1VQ6-01941-01972
X
>1NJI-A1941-A1972
X
>1YJN-01941-01972
X
>1FFK-01894-01925
X
</seq>
<hsp>
0 1:0.590879619072
0 2:0.652529864858
0 3:0.548739084509
0 4:0.753156219738
0 5:0.659173343809
0 6:0.694235702253
0 7:0.653199876239
0 8:0.750264674379
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0 10:0.700046631498
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0 12:0.681330340342
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1 6:0.929848419305
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1 11:0.892521704569
1 12:0.81016423746
1 13:1.0
2 3:0.276215918075
2 4:0.258136781113
2 5:0.110632964741
2 6:0.280539045289
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3 5:0.289032757973
3 6:0.190689990052
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9 10:0.139332450512
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10 12:0.173564518047
10 13:0.553701248208
11 12:0.282031532882
11 13:0.427520879047
12 13:0.482768755871
</hsp>